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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015797681.1_cds_XP_016456334.1_4970
CDS Infomation

[gene=LOC107780320] [db_xref=GeneID:107780320] [protein=ornithine aminotransferase, mitochondrial-like] [protein_id=XP_016456334.1] [location=complement(join(26641..26791,29039..29272,29860..29940,30504..30601,30721..30873,31191..31246,31373..31532,33588..33818,35395..35503,40214..40365))] [gbkey=CDS]
Sequence

ATGGCGATGAAGAGGCCTTTGCAGTGTATGTTGAGGAGGATTTACAGGAGAGGAGGAAGT
TTTAGAAGTTTTACTGCACTTCCTGAAGGCAGCACCACAACTTCCCCTTCTCAAAATCTC
ATCGATTTGGAGTATGAGTGCAGTGCTCACAATTACCATCCGATTCCTATCGTCTTTTCT
AGAGCTAAGGGTTCATCCATCTGGGATCCTGAAGGGAAAAAGTATCTTGATTTCCTCTCA
GCTTATTGTGCTGTCAATCAGGGACACTGTCATCCAAAGATCATGAAAGCATTAGCAGAA
CAGGCTCAAACGCTCACTCTTAGTTCTCGTGCCTTCTATAATGATAAGTTTCCAGTATTT
GCAGAATATATAACCAACATGTTTGGATATGATATGGTGCTACCAATGAACACTGGTGCA
GAAGGAGTAGAAACAGCTCTTAAGCTGGCAAAGAAATGGGGTTACATGAACAAAAGAATA
CCGAAAAACGAGGCTATCATTGTCTCATGTTGTGGCTGCTTCCATGGTCGGACATTGGCT
GCGATCTCCATGAGTTGTGACAATGAAGCTACTCATGGTTTTTGGCCCCTATTACCTGGG
CAACTTAAAGTTGATTTTGGAGACGTTGTTGCCCTTGAAAAATTATTTAAAGAGAAAGGA
GATCAGATCGCTGGCTTTTTGTTTGAACCAATTCAAGGAGAGGCTGGGGTTATAATTCCG
CCAGAAGGTTACCTGAAGGCTGTTAGAGATCTTTGCTCAAAGTATAATATTTTGATGATT
GCTGATGAAATACAAAGTGGCTTGGCACGCTCTGGTAGATTGCTGGCTTGTGATTGGGAA
GAAGTTCGTCCAGATGTTGTTATATTGGGAAAAGCATTAGGTGGTGGAGTCTTGCCTGTG
AGTGCTGTACTTGCAGATAAAGATGTTATGCTTTGTATTCAGGCCGGAGAGCATGGAAGC
ACCTTTGGGGGGAATCCTTTGGCTAGTGCAGTTGCAATTGCATCTTTAGACGTGATAAGA
GACGAAGGACTTGCAGAGAGATCTGCTCAGATGGGAGAGCAACTTAGACATCAGTTGATG
AAGGTTCAGGGGCAGTTTCCTAATTTCATAAAAGAAGTTCGAGGGAAAGGCCTATTCAAT
GCTGTGGAGCTTAATAGTAAGGCTTTGTTACCTGTGACAGCTTATGACATATGTATGAAA
CTGAAGGAGAGAGGAATTCTTGCTAAGCCAACTCATGATTCTATAATACGCTTGACGCCC
CCGCTGTCCATGAGTTTGGAGGAGCTCCAAGAAGGCTCTAAGGCCCTGCATGATGTTTTT
GAACTTGATCTACCGAAGATGCAGAAAGAGAAGCCAGCAACAGTTTCCCATGCTACCTCT
AGTGTCTGTGACCGCTGTGGCCGCAACTTATATGGCTCTTCATAA

Peptide Sequence

PEP ID

XP_016456334.1
PEP Infomation

PREDICTED: ornithine aminotransferase, mitochondrial-like [Nicotiana tabacum]
Sequence

MAMKRPLQCMLRRIYRRGGSFRSFTALPEGSTTTSPSQNLIDLEYECSAHNYHPIPIVFS
RAKGSSIWDPEGKKYLDFLSAYCAVNQGHCHPKIMKALAEQAQTLTLSSRAFYNDKFPVF
AEYITNMFGYDMVLPMNTGAEGVETALKLAKKWGYMNKRIPKNEAIIVSCCGCFHGRTLA
AISMSCDNEATHGFWPLLPGQLKVDFGDVVALEKLFKEKGDQIAGFLFEPIQGEAGVIIP
PEGYLKAVRDLCSKYNILMIADEIQSGLARSGRLLACDWEEVRPDVVILGKALGGGVLPV
SAVLADKDVMLCIQAGEHGSTFGGNPLASAVAIASLDVIRDEGLAERSAQMGEQLRHQLM
KVQGQFPNFIKEVRGKGLFNAVELNSKALLPVTAYDICMKLKERGILAKPTHDSIIRLTP
PLSMSLEELQEGSKALHDVFELDLPKMQKEKPATVSHATSSVCDRCGRNLYGSS

Transcript Sequence

Gene sequence data has not been registered.